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Quick Start

Animove is displayed in the upper-right area of Fiji's menu bar.

Menu bar image

File requirements are available in each function description.

Workflows and Processes

Refer to this documentation's reproducibility section for a thorough step-bey-step guide.

Test Data

DOI

Test data is available in this repository. Notably:

  • Adults
    • Gutter/Track (short and long versions)
    • Plus Maze
    • Tank (sideways recording)
    • Tracking data
  • Larvae
    • Six-well plate (short and long versions)
    • Tracking data

These may be used to experiment on the plugin's capabilities or simply to get used to the workflows.

Distributed under the CC BY 4.0 License

Grayscale Converting Disclaimer

All RGB videos get converted to grayscale for processing. All image channels will get merged into a single one.

The conversion is handled by OpenCV, using the proportions: 0.114 * B + 0.587 * G + 0.229 * R

These are the same proportions ImageJ uses in AVI_Reader and ColorProcessor conversions.